=== Tikz Externalize and Hyperref===
Tikz Externalize does not work well with Hyperref without some extra measures. In order to get around the problem, include the following lines in your preamble
\tikzifexternalizing{% \renewcommand{\hypersetup[1]}{} }{% \usepackage{hyperref} } \hypersetup{ colorlinks, % These are of course only example options. bookmarksnumbered, linkcolor={blue!50!black}, citecolor={blue!50!black}, urlcolor={blue!50!black} } % \hypersetup{draft} % Remove the comment character for printing.